FastQCFastQC Report
Sat 13 May 2023
EGAF00001793748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31651058
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1353390.42759708064103263No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1085730.34303118714072683No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT681590.21534509209771122No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)