FastQCFastQC Report
Sun 14 May 2023
EGAF00001793750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31747660
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT968070.3049264103244144No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT764720.24087444554968776No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT496930.156524921836759No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)