FastQCFastQC Report
Sun 14 May 2023
EGAF00001793754

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793754
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33843128
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT774990.22899479031607242No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT609030.17995676995341564No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT397450.11743890812929586No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)