FastQCFastQC Report
Tue 26 Sep 2023
EGAF00001793773

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793773
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35869382
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1270040.3540735661406154No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1043940.2910393047753095No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT674940.18816605203847672No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)