FastQCFastQC Report
Tue 26 Sep 2023
EGAF00001793774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001793774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35869382
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1048480.29230500821006616No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT822500.22930420156109743No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT521330.14534122723385642No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)