FastQCFastQC Report
Sat 3 Sep 2022
EGAF00001802705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001802705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241821
Sequences flagged as poor quality0
Sequence length35-301
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAACA14061658.148796010272065No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAGCA2573810.643409794848257No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAGTGAAGATTTGGGCAGGCCA213578.831739178979493No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAACG41021.696296020610286No Hit
TCCGTAGGTGAACCTGCGGAAGGTTCATTGTCGTGACCCTGACCAAAACA20790.8597268227325171No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGTCCCTGACCAAAACA17570.7265704798177164No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCACAACA11440.47307719346127924No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAACACA7950.328755567134368No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGGGACCCTGACCAAAACA5330.22041096513536873No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTATCGTGACCCTGACCAAAACA4390.18153923770061325No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAACCA4290.1774039475479797No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACTCTGACCAAAACA4020.16623866413586907No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAGACCCTGACCAAAACA3880.1604492579221821No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGCCGTGACCCTGACCAAAACA3880.1604492579221821No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTTACCCTGACCAAAACA3820.15796808383060199No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAGACA3560.14721632943375473No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCCGACCAAAACA3280.13563751700638077No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCGAAACA3270.1352239879911174No Hit
TCCGTAGGTGAACCTGCGGAAGGGTCATTGTCGTGACCCTGACCAAAACA3250.1343969299605907No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAGTGAATTTTAGGGACTCCAC3180.13150222685374718No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGCGACCCTGACCAAAACA3160.13067516882322047No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGGCCCTGACCAAAACA3110.1286075237469037No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCCAAACA3030.12529929162479686No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAGAACA3000.12405870457900679No Hit
TCCGTAGGTGAACCTGCGGACGGCATCGATGAAGAACGCAGC2850.11785576935005646No Hit
TCCGTAGGTGAACCTGCGGAGGGATCATTGTCGTGACCCTGACCAAAACA2820.11661518230426637No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAACC2820.11661518230426637No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCATGACCCTGACCAAAACA2800.11578812427373968No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGCCCAAAACA2760.11413400821268624No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGAACCTGACCAAAACA2690.11123930510584276No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCTTGACCAAAACA2680.11082577609057939No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGGCCAAAACA2610.10793107298373589No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTAACCAAAACA2600.10751754396847255No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGATCCTGACCAAAACA2580.10669048593794585No Hit
TCCGTAGGTGAACCTGCGGAAGGACCATTGTCGTGACCCTGACCAAAACA2570.10627695692268248No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTAGTGAAGATCTGGGCAGGCCA2570.10627695692268248No Hit
TCCGTAGGTGAACCTGCGGAAGGATCGTTGTCGTGACCCTGACCAAAACA2550.10544989889215578No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATCGTCGTGACCCTGACCAAAACA2530.10462284086162905No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTTGTGACCCTGACCAAAACA2480.10255519578531228No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACACTGACCAAAACA2470.1021416667700489No Hit
TCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTAACCCTGACCAAAACA2470.1021416667700489No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)