FastQCFastQC Report
Sat 3 Sep 2022
EGAF00001802706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001802706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241821
Sequences flagged as poor quality0
Sequence length35-301
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG16887269.83347186555345No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGTTG203498.41490193159403No Hit
GCTGCGTTCGTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG21520.8899144408467421No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG18020.7451792855045675No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG12320.5094677468044545No Hit
GCTGCGTTCTTCATCGATGCGAGGGCCGAGATATCCGTTGCCGAGAGTCG11070.45777661989653506No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG10160.42014547950756964No Hit
GCTGCGTTCTTCATCGATGCGAGAACCGAGATATCCGTTGCCGAGAGTCG8890.36762729456912346No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT8050.3328908572870016No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG7700.3184173417527841No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTCGCCGAGAGTCG4690.19394510815851396No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGCCG4640.19187746308219716No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTAG4560.18856923096009032No Hit
GCTGAGTTCGTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4490.18567452785324684No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGGGAGTCG4420.18277982474640334No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGCGTCG4370.18071217967008654No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGGGTCG4350.17988512163955986No Hit
GCTGCGTTCTTCATCGATGCGGGAGCCGAGATATCCGTTGCCGAGAGTCG4260.17616336050218964No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGCGAGTCG4160.17202807034955606No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4110.1699604252732393No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGGTATCCGTTGCCGAGAGTCG3970.1641710190595523No Hit
GCTGCGTTCGTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGTTG3950.1633439610290256No Hit
GCTGCGTTCTTCATCGATGCGAGAACCGAGAGATCCGTTGTCGAAAGTTG3810.15755455481533862No Hit
GATGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3770.1559004387542852No Hit
GATGCGTTCGTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3750.15507338072375848No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG3590.1484569164795448No Hit
GCTGAGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3580.14804338746428142No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAAAGTCG3510.14514868435743794No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCGAGATATCCGTTGCCGAGAGTCG3510.14514868435743794No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGACG3480.1439080973116479No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGCTGCCGAGAGTCG3450.1426675102658578No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3360.13894574912848762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCAAGAGTCG3360.13894574912848762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATGTCCGTTGCCGAGAGTCG3180.13150222685374718No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGGGATATCCGTTGCCGAGAGTCG3140.1298481107926938No Hit
GCTGCGTTCTTCATCGATGCCGTCCGCAGGTTCACCTACGGA3080.12736693670111363No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA2790.1153745952584763No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAAAGTTG2710.11206636313636946No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGCCGAAAGTTG2650.10958518904478932No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGCTATCCGTTGCCGAGAGTCG2600.10751754396847255No Hit
GCTGCGTTCGTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGGCG2580.10669048593794585No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATACCCGTTGCCGAGAGTCG2450.10131460873952221No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG2450.10131460873952221No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)