FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001809287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001809287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1414430
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAGTACAAGATCTCGTA184931.3074524720205312TruSeq Adapter, Index 14 (97% over 38bp)
TGTGTAGCAGGAGTTGAAGGTGTGAGACCGCACCAGCGACACAAGATCGG26830.18968771872768533No Hit
TGTGTGGGAGGTGACCCCGGTGAGACCGCACCAGCGACACAAGATCGGAA15540.10986757916616587No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)