FastQCFastQC Report
Tue 7 May 2024
EGAF00001816746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001816746
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences614
Total Bases155.3 kbp
Sequences flagged as poor quality0
Sequence length252-253
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA16727.19869706840391No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA9916.123778501628664No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA6911.237785016286644No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA569.120521172638437No Hit
AACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA315.048859934853421No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA203.257328990228013No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA152.44299674267101No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA132.1172638436482085No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA121.9543973941368076No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTA111.7915309446254073No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA91.4657980456026058No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTA71.1400651465798046No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA60.9771986970684038No Hit
TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCA40.6514657980456027No Hit
TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCA40.6514657980456027No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATGACTGGGTGTAAAGGGAGCGTA40.6514657980456027No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA30.4885993485342019No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA30.4885993485342019No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATCATTGGGCGTAAAGAGGGAGCA30.4885993485342019No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA30.4885993485342019No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA20.32573289902280134No Hit
TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCA20.32573289902280134No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA20.32573289902280134No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCA20.32573289902280134No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGTGCGTA20.32573289902280134No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA20.32573289902280134No Hit
AACGTAGGTCCCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA20.32573289902280134No Hit
TACGTAGGGGGCGAGCGTTATCCGGATTCATTGGGCGTAAAGCGCGCGTA20.32573289902280134No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTA20.32573289902280134No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTA20.32573289902280134No Hit
TACGTATGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCA20.32573289902280134No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTA20.32573289902280134No Hit
TACGTAGGGCGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA20.32573289902280134No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGATGTAAAGGGAGCGTA20.32573289902280134No Hit
TACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCA20.32573289902280134No Hit
TACGTATGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA20.32573289902280134No Hit
TCCGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGATCGTA10.16286644951140067No Hit
TAAGTAGGTGGCGAGCGTTATCCGGAATGATTGGGCGTAAAGGGTGCGTA10.16286644951140067No Hit
AACGTCGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTAGGGGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGCGCGCGTA10.16286644951140067No Hit
TACGTAGGGTGCAAGCGTTATCCGGAACTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTAGGGTGCAAGCGTTATCCTGAATTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTA10.16286644951140067No Hit
AACGTAGGTCACAAGCGTTGTCCGGACTTACTGGGTGTACCGGGAGCGCA10.16286644951140067No Hit
TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGTA10.16286644951140067No Hit
TACGGAGGATCCGAGCGTTATCCGGATTTACTGGGTTTAAAGGGAGCGTA10.16286644951140067No Hit
AACGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAGAGGGAGCGCA10.16286644951140067No Hit
AACGTAGGGTGCAAGCGTTGCCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
AAAGTAGGTTACAAGCGTTGTCAGGAATTAATGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTATGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAACGCA10.16286644951140067No Hit
TACGTAGGGTGCAAGCGGTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
AACGTAGGTCACAAGCGTTATCCGGATTTACTGGGTGTAAAGGGTGCGTA10.16286644951140067No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTCAAGGGAGCGCA10.16286644951140067No Hit
TGCGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGTAGGTGGCGAGCGTTATCCGGAATTATTGGGCGTAAAGCGCTCGTA10.16286644951140067No Hit
TACGTAGGTGACAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTA10.16286644951140067No Hit
TACGTAGGGAGCGAGCGTTGTCCGGAATGACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TAAGGAGGGGGCAAGGGTTATCCGGAATGATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTACTGGGCGTAAAGGGCTCGCA10.16286644951140067No Hit
TACGTAGGGTGCAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTTGTA10.16286644951140067No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGCTGTAAAGGGTGCGTA10.16286644951140067No Hit
TACGTAGGGTGCAAGAGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
AACGTAGGGTGCAAGCGTTGCCCGGAATTACTGGGTGTACAGGGAGCGCA10.16286644951140067No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGTAGGGTGCACGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGGAGGATTCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTA10.16286644951140067No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTA10.16286644951140067No Hit
TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAACGGGAGCGCA10.16286644951140067No Hit
TATGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTA10.16286644951140067No Hit
AATGTAGGTCACAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCA10.16286644951140067No Hit
TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAACGGGAGCGCA10.16286644951140067No Hit
AACGTAGGTCACAAGCGTTATCCGGAATTATTGGGCGTAAAGGGCTCGTA10.16286644951140067No Hit
TACGTAGGGGGCAAGCGTTATCCGGAATTACTGGGTGTAAAGGGAGCGTA10.16286644951140067No Hit
TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGCA10.16286644951140067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)