FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001817187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001817187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4233865
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT296860.7011560359151744No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT131920.31158291537401406No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT121050.28590897442407825No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)