FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001817294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001817294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3042
Sequences flagged as poor quality0
Sequence length151
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCAC50.1643655489809336No Hit
AGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTC40.13149243918474687No Hit
CAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAA40.13149243918474687No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)