FastQCFastQC Report
Wed 8 May 2024
EGAF00001817670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001817670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1510411
Total Bases228 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44570.2950852450094709No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29720.19676763476960904No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19920.13188463272579448No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)