FastQCFastQC Report
Fri 10 May 2024
EGAF00001817944

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001817944
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1466059
Total Bases221.3 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25040.1707980374596111No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16510.11261484019401675No Hit

[OK]Adapter Content

Adapter graph