FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001818302

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001818302
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2194451
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC35290.16081470946491855No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA32690.14896664359331788No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC30360.1383489537929988No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA29290.1334730189919939No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC26950.12280975970755327No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC21990.1002072955832689No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)