FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001819288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001819288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1735135
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC31650.18240655626219285No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA29700.17116823762992503No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC26310.1516308529307518No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC23000.1325545274575177No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA21810.12569627147167223No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC17880.10304673699740943No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)