FastQCFastQC Report
Wed 8 May 2024
EGAF00001819783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001819783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2312807
Total Bases349.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT66950.28947508374023423No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT39310.1699666249713011No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)