FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001819900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001819900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences755841
Sequences flagged as poor quality0
Sequence length151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA10630.14063804424475518No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT8040.10637157814937269No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC7760.10266709532825026No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)