FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001820210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001820210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1678824
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA28060.16714080808947215No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC27880.16606862899267583No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC24500.1459354881750559No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA22480.13390325608878595No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC21330.12705322297036498No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC16900.10066570408809976No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)