FastQCFastQC Report
Tue 13 Sep 2022
EGAF00001820441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001820441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5241219
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT311660.5946326608371068No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT154170.2941491282848513No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT130240.24849181077913363No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)