FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001820558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001820558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1811
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTATACATAGACATACACGCAGACTGCTTTGGTTTCTGTACTCACTGA20.11043622308117064No Hit
GAGATGTCTCGCTCCGTGGCCTTAGCTGTGCTCGCGCTACTCTCTCTTTC20.11043622308117064No Hit
ATGTAGGGTTATAATAATGTTAACATGGACATGATCTTCTTTATAATTCT20.11043622308117064No Hit
AAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGG20.11043622308117064No Hit
ATGTATAAGAAGTAAATATGAATCTTATATGACAAAATGTTTCATTCATT20.11043622308117064No Hit
GAATAACGCCGCCGCATCGCCGGTCGGCATCGTTTATGGTCGGAACTACG20.11043622308117064No Hit
GTCCCAGCTGTTGTCTTTGATCATGTGGTTGAGTTCAATGATGTACTTCC20.11043622308117064No Hit
GTCCCACACTGGTACCACTTCTCCTGCTTCTGGAAGGTGGGCCACTCCAT20.11043622308117064No Hit
GTTACCAGGAGACACTGGAACCTCAGGTCTATAAAAACTGGAGGGGCAGT20.11043622308117064No Hit
ATTTTGAATCCAGAAATAATGAAATAACTAGGCGTGGTCTTACTATTTAT20.11043622308117064No Hit
GTCCGGCGTGGTCTGCACTCGGATGATGATCTTGTGCTCCAAGGGGTGGG20.11043622308117064No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT20.11043622308117064No Hit
GGAAAGGGCTCCTTCAAGTATGCCTGGGTCTTGGATAAACTGAAAGCTGA20.11043622308117064No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)