FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001821110

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001821110
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences914198
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC12610.1379351081494381No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT12540.13716940969024216No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC9730.10643208582823413No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)