FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001821334

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001821334
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2120581
Sequences flagged as poor quality0
Sequence length151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA31810.15000605966006486No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC22800.10751770387455135No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC22640.10676319367192294No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC22430.10577289903097312No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC21730.10247191689447373No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)