FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001821708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001821708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3530676
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT145090.4109411342190561No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT72590.20559802145538134No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT54790.15518274687340328No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)