FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001821729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001821729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3236487
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT168240.5198228820322776No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT119540.3693510896227916No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT75910.2345444304271885No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)