FastQCFastQC Report
Sun 4 Sep 2022
EGAF00001822250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001822250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences827538
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA16170.1953988819848756No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC12950.1564882821090995No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC11870.14343752190231748No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA11110.13425365360865604No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC9830.11878608595617363No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC9530.11516087478762305No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC9330.11274406734192266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)