FastQCFastQC Report
Wed 8 May 2024
EGAF00001822766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001822766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1003947
Total Bases151.5 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC12530.12480738525041661No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC10600.10558326286148573No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT10110.1007025271254359No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)