FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001823586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001823586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1699453
Sequences flagged as poor quality0
Sequence length151
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC29180.17170230656570085No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA26850.15799201272409416No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA24870.14634120508187046No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC23290.1370440959532273No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC19540.11497817238840968No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC19170.11280100126334767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)