FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001823804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001823804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1563654
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC22890.14638788376456685No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT17600.11255686999809421No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC15950.10200466343577289No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)