FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001823892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001823892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1831533
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC21500.11738800229097703No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA20830.11372986454516516No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC18770.10248245595356459No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)