FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001823936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001823936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2007719
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC35980.17920834539096356No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA34160.17014333181087593No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC33060.1646644774492845No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC29050.1446915629129375No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA27670.13781809107748644No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC20120.10021322705019975No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)