FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001823986

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001823986
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1815856
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC41190.22683516754632527No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA38550.2122965697720524No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC35030.19291177273968863No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC32240.1775471182736957No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA22090.12165061546730578No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC20930.11526244371800408No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)