FastQCFastQC Report
Wed 8 May 2024
EGAF00001824030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001824030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences815985
Total Bases123.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA10460.1281886309184605Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC8410.10306562007880048No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)