FastQCFastQC Report
Mon 12 Sep 2022
EGAF00001824187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001824187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3617066
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT160130.4427068790008255No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT97290.26897490949847197No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT76300.21094445055744077No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)