FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001824423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001824423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1591
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.5656819610307983No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90.5656819610307983No Hit
TGTTAACATTATTATAACCCTACATTTTGTGCATAAAGTGTAAGTGTATA30.18856065367693275No Hit
CTATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGT30.18856065367693275No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.18856065367693275No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.18856065367693275No Hit
CCCCTGGAGAATATTTTGTAGATAACAAGCTGATTTTAAAATTTATATGG20.1257071024512885No Hit
CTCTTATACCTCTCTCCACTTGAAACTATTTACAAGCATGACTAGCATAA20.1257071024512885No Hit
ATCCAGAACCTCCACTCTTTCGACCCCTTTGCTGATGCAAGTAAGGGTGA20.1257071024512885No Hit
CAATCGGAGGGTAGATGGAAAGAGGAAGGGAGGGAAAGAGGGAGGGAGGA20.1257071024512885No Hit
ATACGAATGCCCCCGGCCGTCCCTCTTAATCATGGCCTCAGTTCCGAAAA20.1257071024512885No Hit
CCAAATGAGACTCTCTGAGAAGATCACTCCATTGAAGACTTGTTTTAAGA20.1257071024512885No Hit
GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT20.1257071024512885No Hit
GTATTAATTCGGGGCTCTGTAGTCCTTTCTCTCAATTTTCTTTTAAATAC20.1257071024512885No Hit
ATTATAACCCTACATTTTGTGCATAAAGTGTAAGTGTATAAGCATATCAA20.1257071024512885No Hit
CCAATGGATCCTCGTTAAAGGATTTAAAGTGGACTCATTCCAATTACAGG20.1257071024512885No Hit
CTCCTACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGG20.1257071024512885No Hit
TTGTCACACCATGCACAGCAAATCCAGGAACAGCAGGCACGAAAACACCA20.1257071024512885No Hit
CCACTTAACTATCTTGGGCTGTGACAAAGTCACATGGTTCACACGGCAGG20.1257071024512885No Hit
ATTCTAAGCAGAGTATGTAAATTGGAAGTTAACTTATGCACGCTTAACTA20.1257071024512885No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1257071024512885No Hit
ACACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGAC20.1257071024512885No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)