FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001824424

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001824424
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1591
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAAT20.1257071024512885No Hit
AAATAGAACCGCGGTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG20.1257071024512885No Hit
GGTGTATGCATCGGGGTAGTCCGAGTAACGTCGGGGCATTCCGGATAGGC20.1257071024512885No Hit
CAGGCGCGCAAATTACCCACTCCCGACCCGGGGAGGTAGTGACGAAAAAT20.1257071024512885No Hit
CTCCATGTTTGATGTATCTGAGCAGGTTGCTCCACAGGTAGCTCTAGGAG20.1257071024512885No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC20.1257071024512885No Hit
ATGTATAAGAAGTAAATATGAATCTTATATGACAAAATGTTTCATTCATT20.1257071024512885No Hit
GCCCCCGGCCGTCCCTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAA20.1257071024512885No Hit
ACTCTGTCCTGTCGCGTGTTTGTGTATCTCTGTTTGCCAGTCTCACACTG20.1257071024512885No Hit
GTTCAGGATAATCACCTGAGCAGTGAAGCCAGCTGCTTCCATTGGTGGGT20.1257071024512885No Hit
CCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAA20.1257071024512885No Hit
ATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAACAT20.1257071024512885No Hit
CGCCTTTGCCGATCCGCCGCCCGTCCACACCCGCCGCCAGCTCACCATGG20.1257071024512885No Hit
TTCTAGAAGAGTGTTTAATATTGGCCTCAAAGACCTCAGGGTTCCAGTTC20.1257071024512885No Hit
TTACACCCTAAAGCCTGAAACCTGAACCCCAATCCTCTGACAGAAGAACC20.1257071024512885No Hit
ATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTT20.1257071024512885No Hit
GCATCATTCTATAAAAGTGAAACACCCTTGTTGCCTCTCCTCTCCCTAAA20.1257071024512885No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)