FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001824948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001824948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1742186
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT21830.12530235003610407No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC20730.1189884432546238No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC20720.11893104410206487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)