FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001824980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001824980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1773925
Sequences flagged as poor quality0
Sequence length151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC21000.11838155502628353No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT19710.11110954521752611No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC18270.10299195287286665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)