FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001825236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001825236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1905092
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC36420.19117186991494373No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA33540.17605448975692514No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC31800.16692107257812222No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC26480.13899591200844894No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA25620.13448169432237395No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC21380.11222555131195763No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)