FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001825314

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001825314
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1737608
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC35340.20338304151454184No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA32960.18968605116919351No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC31320.18024778891441567No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC28190.16223452009889455No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA26960.1551558234078112No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC18480.10635310150505753No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC17480.10059806354482713No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)