FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001825764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001825764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1664
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAGGCCGAGTTCCAGAGCATGGGGTCTCGGTTGTCCCAGCCTTTTGA30.18028846153846154No Hit
CGATTTCCCGCTCGGCCGTGGTGGTGAAGCTGTAGCCGCGCTCGGTGAGG20.1201923076923077No Hit
CTGCTTGCTAATCCACATCTGCTGGAAGGTGGACAGTGAGGCCAGGATGG20.1201923076923077No Hit
GGCCTTAGCTGTGCTCGCGCTACTCTCTCTTTCTGGCCTGGAGGCTATCC20.1201923076923077No Hit
ATCTGGGGAGGGGCTGTTCCCTCACAGAGGGAGCCTCTAAGCCCACCAGG20.1201923076923077No Hit
GAATTGAAAAAGTGGAGCATTCAGACTTGTCTTTCAGCAAGGACTGGTCT20.1201923076923077No Hit
CATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACC20.1201923076923077No Hit
ACCATTTAGTATCTAATGTGAGAATATTGTTTCCAAAACTGGTTCATAAA20.1201923076923077No Hit
AGAAAAGACATTAAAGGCATACAGACTGGAAAGAAAGAAATGAAACTATG20.1201923076923077No Hit
TTCCAGATGCATGATCCAGCTGTGTGTTTTCAATCCTTGGGAGGGTGCCA20.1201923076923077No Hit
TTTGGTGCTTGTGCATCTTTTTATGAGCTTTCTTCATTTTCTTCTGCATC20.1201923076923077No Hit
CACTTCCTCTGACTCGTTTACCACCATATTCAACAACTGCAGACACGAGC20.1201923076923077No Hit
TATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGA20.1201923076923077No Hit
GTGGCCGTCCTTCCTGGGCAGCCATGTCTGGAGGGCGCCACATCAGGAAT20.1201923076923077No Hit
GAAATAAAGGGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTT20.1201923076923077No Hit
TTTATTGGCTGAGCAAGAAGGGAAGGTACAGTTGGTAATGGCTGCTTCTA20.1201923076923077No Hit
CACCAAGGCTGAGGCACAAGAATTGCTTGAACCCAGAGGCAAGTCAAGAA20.1201923076923077No Hit
GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGT20.1201923076923077No Hit
AGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGG20.1201923076923077No Hit
GATAACGAACGAGACTCTGGCATGCTAACTAGTTACGCGACCCCCGAGCG20.1201923076923077No Hit
GGTGATGACCTGGCCGTCAGGCAGCTCGTAGCTCTTCTCCAGGGAGGAGC20.1201923076923077No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)