FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001825823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001825823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2231581
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT119290.5345537535944247No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT84920.3805373858264612No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50290.2253559247905409No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)