FastQCFastQC Report
Sat 10 Sep 2022
EGAF00001825995

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001825995
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1666220
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT52220.3134039922699283No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29220.1753669983555593No Hit
ATAATACACGGCCGTGTCGTCAGATCTCAGCCTCCTCAACTCCATGTAGG18840.11307030284116143No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCC18750.11253015808236606No Hit
TTATAACTATGTCTCCTGGTTCCAACAACACCCAGGCAAAGCCCCCAAAC18590.11156990073339654No Hit
ACTATATGCATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATG18330.11000948254132106No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT18070.10844906434924559No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)