FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001826979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001826979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1793
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT120.6692693809258227No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.2788622420524261No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.2788622420524261No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.16731734523145567No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.16731734523145567No Hit
GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT20.11154489682097045No Hit
CCTTTGTATGTTTATTGTGGCACTATTCACAATAGCAAAGACTTGGAACC20.11154489682097045No Hit
CTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCAT20.11154489682097045No Hit
CAATTAATCTTTCCATTTTCGTCTGCGTTTAGTAAATGCGTTAACTAGGC20.11154489682097045No Hit
CAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCC20.11154489682097045No Hit
AGCTGAAGGAACAGATTTCTGACATTGATGATGCAGTAAGAAAACTGTAA20.11154489682097045No Hit
CCACGGAAGCAATATGAAATGATCTGCTGCAGTGCTCTGAGCCCTAGGAT20.11154489682097045No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGG20.11154489682097045No Hit
CTTATGGACAGCAGTGAAGAGAGAGAACTGGGGAGAAGACAAAGAAGCAT20.11154489682097045No Hit
GCTTTAAATGACGCAATTCTCCCTGCGTCATGGATTTCAAGGTCTTTTAA20.11154489682097045No Hit
ACGTAGTACGTGTCGTGTAGTACGATGTCTAGTGATGAGTTTGCTAATAC20.11154489682097045No Hit
GTCTCCCATATCAACTGCGATGCTGGTTATATGACTATACATGTTTGTCA20.11154489682097045No Hit
TAACATGGCCTTGGAAGCATTATGATAAAGAGGATAGCTACAAAGGCTAT20.11154489682097045No Hit
CAATTAAATGCAGAATTAAATCCGCTTCTTTTACTTCCTCAAGCGTTGAG20.11154489682097045No Hit
CAATACGAATGCCCCCGGCCGTCCCTCTTAATCATGGCCTCAGTTCCGAA20.11154489682097045No Hit
ATCCTCCTTGCTGAGGTGACCTTGGCCATCCTGCTCTTTGTATATGAACA20.11154489682097045No Hit
CCCCTACAACATTCCTGTTTGTTTCTAGACCTATAACTAGACTAAAGTCC20.11154489682097045No Hit
ACTCTCTCTTTCTGGCCTGGAGGCTATCCAGCGTACTCCAAAGATTCAGG20.11154489682097045No Hit
CTATAGATATTTTGATCCCAAAATGCTGCGGGGCAATGACAGCTCAGTTC20.11154489682097045No Hit
ACCTGGGCTTCCTCCTCTTCAGTAAAGTCATTTTTGATATTGAAGGTCTT20.11154489682097045No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT20.11154489682097045No Hit
TGTCTGGAGACCGCAGATCTTCACCCTCTGGAGTCTCATTTGCAGAGTCT20.11154489682097045No Hit
GTTCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11154489682097045No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.11154489682097045No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)