FastQCFastQC Report
Thu 1 Sep 2022
EGAF00001826980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001826980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1793
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCAATATGCACTGCCGCGTCTGACGGGACAAGGGATCAACCTTTCCCG20.11154489682097045No Hit
GTGTTAGATATTGAGGCTGCTTCGTGTCGGCACGAAGTGTCTTCCGATGC20.11154489682097045No Hit
GCTTATACACTTACACTTTATGCACAAAATGTAGGGTTATAATAATGTTA20.11154489682097045No Hit
CCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATCCTGTCCG20.11154489682097045No Hit
CTTTACCAGCTACGTTTTTATCTTAAGCACATGGGGCTCCCTTAGAACTT20.11154489682097045No Hit
GCTTACATGTCTCGATCCCACTTAACTATCTTGGGCTGTGACAAAGTCAC20.11154489682097045No Hit
GTGTAGCATTAAAAAGCTCACTGCAGCCATATAAAATGTGTTTGCCTTGT20.11154489682097045No Hit
CTGCTGCCTGTCCCACTGCACCAGCAGCTTGTCACCTTTTAAGTCAGAAG20.11154489682097045No Hit
GCTGGTGGGCCACTGGTCCAATCACTCGTGCCATTTATACCACAACACTG20.11154489682097045No Hit
GTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAAT20.11154489682097045No Hit
GTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATAC20.11154489682097045No Hit
GTTTCATTCATTATAACAAATTTCCAATAATCCTGTCAATTATATTTCTA20.11154489682097045No Hit
ATTCCGGATAGGCCGAGAAAGTGTTGTGGGAAGAAAGTTAGATTTACGCC20.11154489682097045No Hit
CTCCAATAGCGTATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA20.11154489682097045No Hit
TGAGTGACGTGTGCAACCATCACCAATATCTAATTTCAGAACATTCTCAT20.11154489682097045No Hit
CTCTTATTCTAGTCTATAACTGTTGTCAGGGTTCTTAGTAATAAAAAACT20.11154489682097045No Hit
GTACATTCCCATGCCTGTTCTCCAGATTTCTGTTTATATAAACTGGAAAA20.11154489682097045No Hit
ACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACG20.11154489682097045No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)