FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001827924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001827924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2191156
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC38830.17721239382316914No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA36720.16758277365920088No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC35320.16119345222339257No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA34970.1595961218644405No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC32750.14946448358765876No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC24770.11304535140355136No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC24610.11231514323945899No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC22360.1020465909319099No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)