FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001828740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001828740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1934651
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT25980.13428778627256285No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC21350.11035582128249488No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC21320.11020075455469747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)