FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001828956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001828956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2086411
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC26080.12499934097356658No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT23440.11234603345170247No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC21830.10462943303117171No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)