FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001829154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001829154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1657796
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC26130.157618910891328No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA24220.14609758981201545No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA23370.14097030032645755No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC22810.13759232137126642No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC20250.12215013186182137No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC17570.10598408971912104No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)