FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001829156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001829156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1986392
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA30970.15591081720023037No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC29890.15047382389780062No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA27820.14005292006814365No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC27330.13758613606981904No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC25340.1275679724847865No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC20180.1015912267065111No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)