FastQCFastQC Report
Sun 11 Sep 2022
EGAF00001829158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00001829158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1762182
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC29120.16524967341625327No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA27840.15798595150784653No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA27350.15520530796478457No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC27070.15361636879732057No Hit
CTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAAC23740.1347193422699812No Hit
CTATTAATGATATTAAAATCCCAACTATACCAAAGAATATCCCAATTATC19800.11236069827066669No Hit
TTGATATTCTCTGCATCCTATTTAGGGCTATTGATATTTAACAAATATCC17780.10089763713396233No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)